Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate c-acetyltransferase | EL161_RS17875 | Not Available | Negative | 4025249 - 4027531 | 84803.9 |
| formate transporter foca | EL161_RS17880 | Not Available | Positive | 4028551 - 4029525 | 34957.6 |
| putative basic amino acid antiporter yfcc | EL161_RS17885 | Not Available | Positive | 4029863 - 4031380 | 54279.2 |
| tonb-dependent receptor plug domain-containing protein | EL161_RS17890 | Not Available | Negative | 4031549 - 4034200 | 95624.9 |
| tdt family transporter | EL161_RS17895 | Not Available | Negative | 4034836 - 4035825 | 35704.1 |
| methyltransferase | EL161_RS17900 | Not Available | Negative | 4035947 - 4037020 | 39581.2 |
| cysteine synthase a | EL161_RS17905 | Not Available | Negative | 4037233 - 4038201 | 34437.6 |
| rdd family protein | EL161_RS17910 | Not Available | Positive | 4038447 - 4039775 | 48647.3 |
| beta-ketoacyl-acp synthase iii | EL161_RS17915 | Not Available | Positive | 4039772 - 4040893 | 40879.8 |
| hypothetical protein | EL161_RS17920 | Not Available | Positive | 4041065 - 4041514 | 16891.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

