Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| segregation and condensation protein a | EL161_RS17720 | Not Available | Positive | 3987761 - 3988549 | 29841.5 |
| smc-scp complex subunit scpb | EL161_RS17725 | Not Available | Positive | 3988553 - 3989149 | 22181.8 |
| 23s rrna pseudouridine(2605) synthase rlub | EL161_RS17730 | Not Available | Positive | 3989142 - 3990017 | 32759.6 |
| hypothetical protein | EL161_RS17735 | Not Available | Positive | 3990131 - 3991093 | 36174.9 |
| is3 family transposase | EL161_RS17740 | Not Available | Positive | 3991189 - 3992405 | 47074.6 |
| ycik family oxidoreductase | EL161_RS17745 | Not Available | Negative | 3992467 - 3993204 | 26416.9 |
| vola/pla-1 family phospholipase | EL161_RS17750 | Not Available | Positive | 3993466 - 3995976 | 86424.7 |
| protease sohb | EL161_RS17755 | Not Available | Positive | 3996089 - 3997105 | 37500.3 |
| arac family transcriptional regulator | EL161_RS17760 | Not Available | Positive | 3997299 - 3998318 | 38428.0 |
| hypothetical protein | EL161_RS17765 | Not Available | Negative | 3998366 - 3999067 | 26444.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

