Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein dedd | EL161_RS17515 | Not Available | Positive | 3940815 - 3941639 | 29543.2 |
| cvpa family protein | EL161_RS17520 | Not Available | Positive | 3941750 - 3942238 | 18076.4 |
| amidophosphoribosyltransferase | EL161_RS17525 | Not Available | Positive | 3942418 - 3943932 | 55785.6 |
| alanine/glycine:cation symporter family protein | EL161_RS17530 | Not Available | Negative | 3944047 - 3945531 | 52873.1 |
| hypothetical protein | EL161_RS17535 | Not Available | Negative | 3945889 - 3946176 | 10714.0 |
| dna topoisomerase iii | EL161_RS17540 | Not Available | Positive | 3946376 - 3948487 | 77091.6 |
| porin | EL161_RS17545 | Not Available | Positive | 3948737 - 3949906 | 43109.7 |
| sigma-54 interaction domain-containing protein | EL161_RS17550 | Not Available | Negative | 3949996 - 3951522 | 57113.6 |
| flavocytochrome c | EL161_RS17555 | Not Available | Positive | 3951688 - 3953241 | 55047.5 |
| hal/pal/tal family ammonia-lyase | EL161_RS17560 | Not Available | Positive | 3953277 - 3954914 | 58779.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

