Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-nad kinase family protein | EL161_RS17465 | Not Available | Positive | 3926845 - 3927987 | 40796.7 |
| yfcl family protein | EL161_RS17470 | Not Available | Positive | 3928043 - 3928324 | 10186.9 |
| rna methyltransferase | EL161_RS17475 | Not Available | Positive | 3928328 - 3928936 | 21792.8 |
| fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | EL161_RS17480 | Not Available | Negative | 3929116 - 3931209 | 77060.8 |
| beta-ketoacyl-acp synthase i | EL161_RS17485 | Not Available | Positive | 3931348 - 3932559 | 43201.6 |
| 4-phosphoerythronate dehydrogenase | EL161_RS17490 | Not Available | Positive | 3932874 - 3934004 | 41340.0 |
| aspartate-semialdehyde dehydrogenase | EL161_RS17495 | Not Available | Positive | 3934007 - 3935023 | 37168.1 |
| fimv/hubp family polar landmark protein | EL161_RS17500 | Not Available | Positive | 3935203 - 3938583 | 121021.0 |
| trna pseudouridine(38-40) synthase trua | EL161_RS17505 | Not Available | Positive | 3938687 - 3939472 | 29080.7 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | EL161_RS17510 | Not Available | Positive | 3939524 - 3940822 | 46900.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

