Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompp1/fadl family transporter | EL161_RS17355 | Not Available | Negative | 3897549 - 3898844 | 46020.6 |
| sodium/proline symporter putp | EL161_RS17360 | Not Available | Negative | 3899185 - 3900636 | 52032.6 |
| duf3379 domain-containing protein | EL161_RS17365 | Not Available | Negative | 3900795 - 3901499 | 26335.5 |
| sigma-70 family rna polymerase sigma factor | EL161_RS17370 | Not Available | Negative | 3901492 - 3902055 | 22062.1 |
| batd family protein | EL161_RS17375 | Not Available | Negative | 3902148 - 3903809 | 60343.4 |
| vwa domain-containing protein | EL161_RS17380 | Not Available | Negative | 3903803 - 3905866 | 75950.2 |
| vwa domain-containing protein | EL161_RS17385 | Not Available | Negative | 3905866 - 3906882 | 38222.4 |
| duf4381 domain-containing protein | EL161_RS17390 | Not Available | Negative | 3906876 - 3907469 | 21313.9 |
| duf58 domain-containing protein | EL161_RS17395 | Not Available | Negative | 3907521 - 3908489 | 36234.7 |
| aaa family atpase | EL161_RS17400 | Not Available | Negative | 3908563 - 3909519 | 35491.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

