Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhac family protein | EL161_RS17055 | Not Available | Positive | 3840062 - 3841630 | 55685.2 |
| m3 family metallopeptidase | EL161_RS17060 | Not Available | Negative | 3841746 - 3843896 | 79527.3 |
| multiheme c-type cytochrome | EL161_RS17065 | Not Available | Negative | 3844068 - 3846215 | 75160.2 |
| thymidine kinase | EL161_RS17070 | Not Available | Positive | 3846755 - 3847333 | 21851.1 |
| transglycosylase domain-containing protein | EL161_RS17075 | Not Available | Positive | 3847622 - 3850693 | 117325.0 |
| sigma-54-dependent transcriptional regulator | EL161_RS17080 | Not Available | Negative | 3850819 - 3852198 | 51540.3 |
| sensor histidine kinase | EL161_RS17085 | Not Available | Negative | 3852195 - 3854006 | 67753.6 |
| trap transporter large permease | EL161_RS17090 | Not Available | Negative | 3854105 - 3855502 | 49384.8 |
| trap transporter small permease | EL161_RS17095 | Not Available | Negative | 3855502 - 3856146 | 24322.9 |
| trap transporter substrate-binding protein | EL161_RS17100 | Not Available | Negative | 3856209 - 3857231 | 37980.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

