Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vii toxin-antitoxin system mnta family adenylyltransferase antitoxin | EL161_RS16690 | Not Available | Negative | 3772190 - 3772612 | 15862.8 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | EL161_RS16695 | Not Available | Positive | 3773020 - 3773280 | 9558.58 |
| type ii toxin-antitoxin system rele/pare family toxin | EL161_RS16700 | Not Available | Positive | 3773282 - 3773629 | 13354.9 |
| j domain-containing protein | EL161_RS16705 | Not Available | Positive | 3773841 - 3775049 | 46896.1 |
| type ii toxin-antitoxin system yafo family toxin | EL161_RS16710 | Not Available | Negative | 3775843 - 3776259 | 16049.4 |
| antitoxin of toxin-antitoxin stability system | EL161_RS16715 | Not Available | Negative | 3776271 - 3776564 | 10441.5 |
| type ii toxin-antitoxin system higb family toxin | EL161_RS16720 | Not Available | Positive | 3776739 - 3776822 | 3156.78 |
| helix-turn-helix domain-containing protein | EL161_RS16725 | Not Available | Positive | 3776833 - 3777201 | 13882.9 |
| hypothetical protein | EL161_RS16855 | Not Available | Negative | 3797333 - 3797704 | 13464.3 |
| hypothetical protein | EL161_RS16860 | Not Available | Negative | 3798379 - 3798741 | 13959.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

