Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is200/is605 family transposase | EL161_RS16585 | Not Available | Positive | 3752027 - 3752371 | 13145.3 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | EL161_RS16590 | Not Available | Positive | 3752469 - 3753458 | 37989.2 |
| dtdp-glucose 4,6-dehydratase | EL161_RS16595 | Not Available | Positive | 3753491 - 3754561 | 40285.4 |
| glucose-1-phosphate thymidylyltransferase rfba | EL161_RS16600 | Not Available | Positive | 3754643 - 3755506 | 31696.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | EL161_RS16605 | Not Available | Positive | 3755516 - 3756067 | 20728.6 |
| nad-dependent epimerase/dehydratase family protein | EL161_RS16610 | Not Available | Positive | 3756070 - 3756897 | 30602.6 |
| lipopolysaccharide biosynthesis protein | EL161_RS16615 | Not Available | Positive | 3756897 - 3758384 | 55330.2 |
| acyltransferase | EL161_RS22665 | Not Available | Positive | 3758388 - 3758894 | 18525.6 |
| acyltransferase | EL161_RS16625 | Not Available | Positive | 3758897 - 3759478 | 21325.1 |
| glycosyltransferase family 2 protein | EL161_RS16630 | Not Available | Positive | 3759478 - 3760371 | 34084.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

