Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal-dependent aspartate 1-decarboxylase panp | EL161_RS01485 | Not Available | Positive | 326413 - 328062 | 60847.5 |
| duf4145 domain-containing protein | EL161_RS01495 | Not Available | Negative | 328606 - 328992 | 14332.8 |
| hypothetical protein | EL161_RS01505 | Not Available | Positive | 329996 - 330460 | 17237.4 |
| nuclear transport factor 2 family protein | EL161_RS01510 | Not Available | Positive | 330496 - 330951 | 17142.3 |
| hypothetical protein | EL161_RS01515 | Not Available | Positive | 331066 - 331440 | 13624.3 |
| sdr family oxidoreductase | EL161_RS01520 | Not Available | Positive | 331583 - 332350 | 26351.6 |
| bifunctional transcriptional activator/dna repair enzyme adaa | EL161_RS01525 | Not Available | Positive | 332364 - 333257 | 33060.4 |
| vat family streptogramin a o-acetyltransferase | EL161_RS01530 | Not Available | Positive | 333382 - 334056 | 24837.8 |
| arac family transcriptional regulator | EL161_RS01535 | Not Available | Positive | 334226 - 335062 | 30934.7 |
| azlc family abc transporter permease | EL161_RS01540 | Not Available | Positive | 335200 - 335895 | 24213.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

