Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | EL161_RS16385 | Not Available | Positive | 3710567 - 3711649 | 38930.2 |
| sigma-54-dependent transcriptional regulator | EL161_RS16390 | Not Available | Positive | 3711642 - 3712982 | 48944.4 |
| flagellar hook-basal body complex protein flie | EL161_RS16395 | Not Available | Positive | 3713160 - 3713498 | 11864.1 |
| flagellar basal-body ms-ring/collar protein flif | EL161_RS16400 | Not Available | Positive | 3713544 - 3715229 | 61250.1 |
| flagellar motor switch protein flig | EL161_RS16405 | Not Available | Positive | 3715222 - 3716268 | 38255.1 |
| flagellar assembly protein flih | EL161_RS16410 | Not Available | Positive | 3716255 - 3717217 | 34778.0 |
| flagellar protein export atpase flii | EL161_RS16415 | Not Available | Positive | 3717186 - 3718523 | 47708.9 |
| flagellar export protein flij | EL161_RS16420 | Not Available | Positive | 3718535 - 3718981 | 17528.0 |
| flagellar hook-length control protein flik | EL161_RS16425 | Not Available | Positive | 3719141 - 3720892 | 61005.3 |
| flagellar basal body-associated protein flil | EL161_RS16430 | Not Available | Positive | 3720976 - 3721500 | 18739.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

