Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein flgk | EL161_RS16335 | Not Available | Positive | 3699472 - 3701397 | 67859.6 |
| flagellar hook-associated protein flgl | EL161_RS16340 | Not Available | Positive | 3701409 - 3702620 | 42923.8 |
| flagellin | EL161_RS16345 | Not Available | Positive | 3702715 - 3703536 | 28568.8 |
| flagellin | EL161_RS16350 | Not Available | Positive | 3703791 - 3704609 | 28412.6 |
| flagellar protein flag | EL161_RS16355 | Not Available | Positive | 3704748 - 3705134 | 13969.7 |
| flagellar filament capping protein flid | EL161_RS16360 | Not Available | Positive | 3705179 - 3706549 | 48475.8 |
| hypothetical protein | EL161_RS16365 | Not Available | Positive | 3706568 - 3706897 | 12371.8 |
| flagellar export chaperone flis | EL161_RS16370 | Not Available | Positive | 3706904 - 3707317 | 15260.3 |
| is200/is605 family transposase | EL161_RS16375 | Not Available | Negative | 3707370 - 3708682 | 49493.0 |
| sigma-54 dependent transcriptional regulator | EL161_RS16380 | Not Available | Positive | 3709025 - 3710458 | 53805.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

