Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | EL161_RS16035 | Not Available | Negative | 3637774 - 3639777 | 72932.8 |
| ydch family protein | EL161_RS16040 | Not Available | Positive | 3640037 - 3640282 | 9574.52 |
| efflux rnd transporter permease subunit | EL161_RS16045 | Not Available | Negative | 3640267 - 3643347 | 111046.0 |
| efflux rnd transporter periplasmic adaptor subunit | EL161_RS16050 | Not Available | Negative | 3643350 - 3644471 | 40606.0 |
| tetr/acrr family transcriptional regulator | EL161_RS16055 | Not Available | Positive | 3644608 - 3645228 | 22923.8 |
| duf6268 family outer membrane beta-barrel protein | EL161_RS16060 | Not Available | Positive | 3645387 - 3646289 | 33339.9 |
| chalcone isomerase family protein | EL161_RS16065 | Not Available | Negative | 3646290 - 3646850 | 20364.7 |
| duf2947 domain-containing protein | EL161_RS16070 | Not Available | Negative | 3647096 - 3647575 | 18856.1 |
| 6-hydroxymethylpterin diphosphokinase mpte-like protein | EL161_RS16075 | Not Available | Negative | 3647703 - 3650180 | 94359.4 |
| udp-n-acetylglucosamine 4,6-dehydratase (inverting) | EL161_RS16080 | Not Available | Positive | 3650582 - 3651577 | 36933.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

