Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase der | EL161_RS15985 | Not Available | Positive | 3620110 - 3621576 | 54649.6 |
| exodeoxyribonuclease vii large subunit | EL161_RS15990 | Not Available | Negative | 3621727 - 3623073 | 50094.8 |
| imp dehydrogenase | EL161_RS15995 | Not Available | Positive | 3623197 - 3624663 | 51688.5 |
| glutamine-hydrolyzing gmp synthase | EL161_RS16000 | Not Available | Positive | 3624781 - 3626358 | 58200.1 |
| trna adenosine(34) deaminase tada | EL161_RS16005 | Not Available | Positive | 3626621 - 3627133 | 18579.3 |
| membrane-bound lytic murein transglycosylase mltf | EL161_RS16010 | Not Available | Negative | 3627573 - 3629009 | 54817.4 |
| phosphoribosylformylglycinamidine synthase | EL161_RS16015 | Not Available | Positive | 3629289 - 3633170 | 140396.0 |
| cytochrome ubiquinol oxidase subunit i | EL161_RS16020 | Not Available | Positive | 3634411 - 3635967 | 58326.2 |
| cytochrome d ubiquinol oxidase subunit ii | EL161_RS16025 | Not Available | Positive | 3635983 - 3637122 | 41920.8 |
| cytochrome bd-i oxidase subunit cydx | EL161_RS16030 | Not Available | Positive | 3637141 - 3637257 | 4412.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

