Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multiheme c-type cytochrome | EL161_RS01435 | Not Available | Positive | 312300 - 314252 | 68187.9 |
| decaheme c-type cytochrome mtra | EL161_RS01440 | Not Available | Positive | 314321 - 315310 | 35735.3 |
| mtrb/piob family decaheme-associated outer membrane protein | EL161_RS01445 | Not Available | Positive | 315323 - 317410 | 77176.1 |
| hypothetical protein | EL161_RS01450 | Not Available | Positive | 317630 - 318262 | 22902.7 |
| uracil-dna glycosylase family protein | EL161_RS01455 | Not Available | Positive | 318262 - 318984 | 26834.7 |
| m4 family metallopeptidase | EL161_RS01460 | Not Available | Negative | 319125 - 320627 | 53690.4 |
| sugar diacid recognition domain-containing protein | EL161_RS01465 | Not Available | Positive | 320859 - 322091 | 46120.4 |
| catalase family peroxidase | EL161_RS01470 | Not Available | Positive | 322331 - 323329 | 36914.9 |
| gntp family permease | EL161_RS01475 | Not Available | Positive | 323596 - 324954 | 46531.4 |
| glycerate kinase | EL161_RS01480 | Not Available | Positive | 325013 - 326158 | 39022.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

