Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4136 domain-containing protein | EL161_RS15830 | Not Available | Positive | 3590893 - 3591453 | 20608.4 |
| trimeric intracellular cation channel family protein | EL161_RS15835 | Not Available | Positive | 3591807 - 3592448 | 23203.2 |
| thiol peroxidase | EL161_RS15840 | Not Available | Negative | 3592483 - 3593076 | 21931.7 |
| mechanosensitive ion channel family protein | EL161_RS15845 | Not Available | Negative | 3593188 - 3594015 | 29902.6 |
| ompa family protein | EL161_RS15850 | Not Available | Negative | 3594047 - 3594637 | 21820.8 |
| low-specificity l-threonine aldolase | EL161_RS15855 | Not Available | Positive | 3594924 - 3595937 | 36338.7 |
| hdod domain-containing protein | EL161_RS15860 | Not Available | Positive | 3596102 - 3597568 | 54850.3 |
| nuclear transport factor 2 family protein | EL161_RS15865 | Not Available | Negative | 3597573 - 3598112 | 20244.8 |
| zinc-dependent peptidase | EL161_RS15870 | Not Available | Negative | 3598164 - 3598988 | 31448.6 |
| diguanylate cyclase | EL161_RS15875 | Not Available | Negative | 3599087 - 3600823 | 65138.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

