Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-2,3-diacylglucosamine diphosphatase | EL161_RS01380 | Not Available | Positive | 297009 - 297728 | 27039.6 |
| trna isopentenyl-2-thiomethyl-a-37 hydroxylase miae | EL161_RS01385 | Not Available | Negative | 297840 - 298610 | 29817.8 |
| yip1 family protein | EL161_RS01390 | Not Available | Positive | 298890 - 299486 | 21662.1 |
| glutamine--trna ligase | EL161_RS01395 | Not Available | Negative | 299666 - 301336 | 64131.6 |
| fe(2+) transporter permease subunit feob | EL161_RS01400 | Not Available | Negative | 301520 - 303814 | 81867.9 |
| feoa family protein | EL161_RS01405 | Not Available | Negative | 303807 - 304046 | 8794.91 |
| dmse family decaheme c-type cytochrome | EL161_RS01410 | Not Available | Positive | 304473 - 305438 | 35056.4 |
| mtrb/piob family decaheme-associated outer membrane protein | EL161_RS01415 | Not Available | Positive | 305452 - 307590 | 79488.4 |
| omca/mtrc family decaheme c-type cytochrome | EL161_RS01420 | Not Available | Positive | 307626 - 309545 | 67426.5 |
| omca/mtrc family decaheme c-type cytochrome | EL161_RS01425 | Not Available | Positive | 309792 - 311966 | 77352.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

