Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 3515708 - 3515784 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3515829 - 3515905 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 3515942 - 3516033 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3516128 - 3516204 | Not Available |
| valine--trna ligase | EL161_RS15445 | Not Available | Negative | 3516636 - 3519512 | 108744.0 |
| dna polymerase iii subunit chi | EL161_RS15450 | Not Available | Negative | 3519528 - 3519992 | 17409.8 |
| ribosome hibernation-promoting factor, hpf/yfia family | EL161_RS15455 | Not Available | Negative | 3521185 - 3521541 | 13345.8 |
| cytochrome b/b6 domain-containing protein | EL161_RS15460 | Not Available | Positive | 3521839 - 3522528 | 25924.4 |
| c-type cytochrome | EL161_RS15465 | Not Available | Negative | 3522594 - 3523043 | 16263.4 |
| trp operon repressor | EL161_RS15470 | Not Available | Positive | 3523233 - 3523508 | 10544.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

