Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ctp synthase | EL161_RS15325 | Not Available | Positive | 3496429 - 3498069 | 60195.2 |
| phosphopyruvate hydratase | EL161_RS15330 | Not Available | Positive | 3498283 - 3499578 | 45675.5 |
| cell division protein ftsb | EL161_RS15335 | Not Available | Positive | 3499679 - 3499978 | 11203.5 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | EL161_RS15340 | Not Available | Positive | 3499989 - 3500738 | 26480.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | EL161_RS15345 | Not Available | Positive | 3500790 - 3501269 | 17007.6 |
| trna pseudouridine(13) synthase trud | EL161_RS15350 | Not Available | Positive | 3501299 - 3502426 | 41805.1 |
| 5'/3'-nucleotidase sure | EL161_RS15355 | Not Available | Positive | 3502423 - 3503172 | 26596.8 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | EL161_RS15360 | Not Available | Positive | 3503169 - 3503804 | 23242.4 |
| peptidoglycan dd-metalloendopeptidase family protein | EL161_RS15365 | Not Available | Positive | 3503903 - 3504799 | 32008.9 |
| rna polymerase sigma factor rpos | EL161_RS15370 | Not Available | Positive | 3504880 - 3505860 | 37088.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

