Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding periplasmic protein | EL161_RS15175 | Not Available | Negative | 3458181 - 3458975 | 29304.3 |
| metallophosphoesterase | EL161_RS15180 | Not Available | Negative | 3459253 - 3460410 | 43842.8 |
| pilc/pily family type iv pilus protein | EL161_RS15185 | Not Available | Positive | 3460970 - 3464641 | 132036.0 |
| tapy2 family type iva secretion system protein | EL161_RS15190 | Not Available | Positive | 3464664 - 3464999 | 12810.6 |
| dsba family protein | EL161_RS15195 | Not Available | Negative | 3465128 - 3465781 | 23894.3 |
| mbl fold metallo-hydrolase | EL161_RS15200 | Not Available | Negative | 3465894 - 3466793 | 32902.4 |
| lysr family transcriptional regulator | EL161_RS15205 | Not Available | Positive | 3466983 - 3467912 | 34244.6 |
| tigr00341 family protein | EL161_RS15210 | Not Available | Positive | 3468179 - 3469186 | 36603.4 |
| energy-dependent translational throttle protein etta | EL161_RS15215 | Not Available | Negative | 3469264 - 3470931 | 62183.0 |
| serine hydroxymethyltransferase | EL161_RS15220 | Not Available | Positive | 3471122 - 3472375 | 45326.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

