Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmc family protein | EL161_RS15120 | Not Available | Positive | 3443314 - 3443742 | 15484.5 |
| tetr/acrr family transcriptional regulator | EL161_RS15125 | Not Available | Negative | 3443832 - 3444452 | 22409.9 |
| efflux rnd transporter periplasmic adaptor subunit | EL161_RS15135 | Not Available | Positive | 3445092 - 3446330 | 44970.5 |
| efflux rnd transporter permease subunit | EL161_RS15140 | Not Available | Positive | 3446344 - 3449493 | 113521.0 |
| hd-gyp domain-containing protein | EL161_RS15145 | Not Available | Positive | 3449617 - 3450885 | 47771.2 |
| nyn domain-containing protein | EL161_RS15150 | Not Available | Negative | 3450906 - 3451379 | 17700.4 |
| arac family transcriptional regulator | EL161_RS15155 | Not Available | Negative | 3451532 - 3452299 | 28779.4 |
| multidrug effflux mfs transporter | EL161_RS15160 | Not Available | Positive | 3452444 - 3453631 | 41990.8 |
| multidrug efflux rnd transporter permease subunit | EL161_RS15165 | Not Available | Negative | 3453714 - 3456869 | 114400.0 |
| efflux rnd transporter periplasmic adaptor subunit | EL161_RS15170 | Not Available | Negative | 3456869 - 3457981 | 39825.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

