Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone anaerobic biosynthesis protein ubiu | EL161_RS15070 | Not Available | Negative | 3433154 - 3434155 | 36971.1 |
| ubiquinone anaerobic biosynthesis accessory factor ubit | EL161_RS15075 | Not Available | Positive | 3434294 - 3434830 | 19677.0 |
| yfhl family 4fe-4s dicluster ferredoxin | EL161_RS15080 | Not Available | Negative | 3434917 - 3435168 | 9349.15 |
| trna 5-hydroxyuridine modification protein yegq | EL161_RS15085 | Not Available | Negative | 3435172 - 3436536 | 50836.5 |
| hdod domain-containing protein | EL161_RS15090 | Not Available | Positive | 3436910 - 3437749 | 30945.4 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | EL161_RS15095 | Not Available | Positive | 3437835 - 3439361 | 57569.8 |
| thioesterase family protein | EL161_RS15100 | Not Available | Negative | 3439390 - 3439803 | 16143.3 |
| adenylosuccinate synthase | EL161_RS15105 | Not Available | Negative | 3439991 - 3441247 | 45540.5 |
| lysr family transcriptional regulator | EL161_RS15110 | Not Available | Positive | 3441383 - 3442276 | 33473.5 |
| substrate-binding periplasmic protein | EL161_RS15115 | Not Available | Negative | 3442292 - 3443110 | 30059.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

