Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endopeptidase la | EL161_RS01330 | Not Available | Negative | 287166 - 289523 | 87547.3 |
| atp-dependent protease atp-binding subunit clpx | EL161_RS01335 | Not Available | Negative | 289656 - 290936 | 46564.7 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | EL161_RS01340 | Not Available | Negative | 291036 - 291644 | 22154.9 |
| trigger factor | EL161_RS01345 | Not Available | Negative | 291734 - 293038 | 47630.9 |
| Trna-his | Not Available | Not Available | Positive | 293301 - 293376 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 293386 - 293462 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 293572 - 293648 | Not Available |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | EL161_RS01365 | Not Available | Positive | 293910 - 294764 | 30577.0 |
| cysteine--trna ligase | EL161_RS01370 | Not Available | Negative | 294988 - 296367 | 52080.9 |
| peptidylprolyl isomerase | EL161_RS01375 | Not Available | Positive | 296508 - 296999 | 18000.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

