Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EL161_RS22350 | Not Available | Negative | 3788695 - 3788859 | 5910.26 |
| zeta toxin family protein | EL161_RS16830 | Not Available | Negative | 3788881 - 3789606 | 27937.5 |
| Bacteriophage integrase | EL161_RS16835 | Not Available | Negative | 3789680 - 3790846 | 46132.7 |
| hypothetical protein | EL161_RS16840 | Not Available | Negative | 3791260 - 3792774 | 58106.7 |
| hypothetical protein | EL161_RS16845 | Not Available | Negative | 3792782 - 3795730 | 114254.0 |
| site-specific integrase | EL161_RS16850 | Not Available | Negative | 3795723 - 3797333 | 61398.4 |
| Attr | Not Available | Not Available | Positive | 3797859 - 3797871 | Not Available |
| Attr | Not Available | Not Available | Positive | 3803474 - 3803512 | Not Available |
| hypothetical protein | EL161_RS00005 | Not Available | Positive | 799 - 1182 | 14219.3 |
| low molecular weight protein-tyrosine-phosphatase | EL161_RS00010 | Not Available | Negative | 1538 - 1987 | 16612.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

