Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| entry exclusion protein eexs | EL161_RS14865 | Not Available | Negative | 3387913 - 3388344 | 16108.0 |
| flhc family transcriptional regulator | EL161_RS14870 | Not Available | Negative | 3388402 - 3388935 | 19930.5 |
| flagellar transcriptional regulator flhd | EL161_RS14875 | Not Available | Negative | 3388932 - 3389231 | 11026.2 |
| lytic transglycosylase domain-containing protein | EL161_RS14880 | Not Available | Negative | 3389228 - 3389776 | 20353.3 |
| duf6475 domain-containing protein | EL161_RS14885 | Not Available | Negative | 3389763 - 3390425 | 24877.6 |
| hypothetical protein | EL161_RS14890 | Not Available | Negative | 3390412 - 3391281 | 33547.6 |
| helix-turn-helix domain-containing protein | EL161_RS14895 | Not Available | Negative | 3391337 - 3391588 | 9408.26 |
| lexa family protein | EL161_RS14900 | Not Available | Positive | 3391706 - 3392353 | 23492.1 |
| peptide chain release factor 3 | EL161_RS14905 | Not Available | Positive | 3392610 - 3394196 | 59649.6 |
| tatd family hydrolase | EL161_RS14915 | Not Available | Positive | 3394458 - 3395222 | 28315.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

