Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein tran | EL161_RS14720 | Not Available | Positive | 3353655 - 3357347 | 132603.0 |
| sir2 family protein | EL161_RS14725 | Not Available | Positive | 3357806 - 3359224 | 52403.4 |
| atp-binding protein | EL161_RS14730 | Not Available | Positive | 3359221 - 3361260 | 76043.3 |
| endonuclease | EL161_RS14735 | Not Available | Negative | 3361669 - 3362382 | 27406.9 |
| isl3 family transposase | EL161_RS14745 | Not Available | Negative | 3362385 - 3363674 | 50374.8 |
| signal peptidase ii | EL161_RS14750 | Not Available | Negative | 3363696 - 3364202 | 18722.7 |
| cation transporter | EL161_RS14755 | Not Available | Negative | 3364212 - 3365108 | 31302.2 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | EL161_RS14760 | Not Available | Positive | 3365204 - 3365611 | 15120.9 |
| hypothetical protein | EL161_RS14765 | Not Available | Negative | 3365841 - 3366443 | 22598.7 |
| hypothetical protein | EL161_RS14770 | Not Available | Positive | 3366810 - 3367136 | 12528.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

