Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein operon transcriptional activator | EL161_RS01280 | Not Available | Positive | 276285 - 277373 | 40581.3 |
| abc transporter substrate-binding protein sapa | EL161_RS01285 | Not Available | Positive | 277443 - 279068 | 60728.8 |
| abc transporter permease | EL161_RS01290 | Not Available | Positive | 279068 - 280099 | 37761.9 |
| abc transporter permease subunit | EL161_RS01295 | Not Available | Positive | 280086 - 280976 | 31866.6 |
| oligopeptide/dipeptide abc transporter atp-binding protein | EL161_RS01300 | Not Available | Positive | 280980 - 281987 | 37315.1 |
| atp-binding cassette domain-containing protein | EL161_RS01305 | Not Available | Positive | 281968 - 282753 | 29564.0 |
| enoyl-acp reductase fabv | EL161_RS01310 | Not Available | Positive | 282859 - 284061 | 43912.3 |
| tobe domain-containing protein | EL161_RS01315 | Not Available | Positive | 284180 - 284392 | 7236.81 |
| peptidylprolyl isomerase | EL161_RS01320 | Not Available | Negative | 284542 - 286407 | 67666.1 |
| nucleoid-associated protein hu-beta | EL161_RS01325 | Not Available | Negative | 286634 - 286921 | 9991.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

