Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase | EL161_RS01230 | Not Available | Positive | 268245 - 269147 | 33602.9 |
| late competence development comfb family protein | EL161_RS01235 | Not Available | Positive | 269181 - 269468 | 11470.7 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 269620 - 269717 | Not Available |
| comea family dna-binding protein | EL161_RS01245 | Not Available | Negative | 269952 - 270317 | 12857.7 |
| methionine gamma-lyase | EL161_RS01250 | Not Available | Negative | 270532 - 271725 | 42848.5 |
| tigr01620 family protein | EL161_RS01255 | Not Available | Negative | 272040 - 273242 | 44347.7 |
| ycjx family protein | EL161_RS01260 | Not Available | Negative | 273239 - 274699 | 54648.5 |
| envelope stress response membrane protein pspc | EL161_RS01265 | Not Available | Negative | 274794 - 275180 | 14376.5 |
| envelope stress response membrane protein pspb | EL161_RS01270 | Not Available | Negative | 275167 - 275406 | 9154.2 |
| phage shock protein pspa | EL161_RS01275 | Not Available | Negative | 275424 - 276107 | 25608.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

