Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease e inhibitor rrab | EL161_RS01130 | Not Available | Negative | 246319 - 246705 | 14493.5 |
| rna-binding s4 domain-containing protein | EL161_RS01135 | Not Available | Negative | 246728 - 246958 | 8217.9 |
| gnat family n-acetyltransferase | EL161_RS01140 | Not Available | Negative | 247029 - 247565 | 20429.1 |
| peptidylprolyl isomerase | EL161_RS01145 | Not Available | Negative | 247640 - 247918 | 9819.7 |
| duf885 domain-containing protein | EL161_RS01150 | Not Available | Negative | 248098 - 249927 | 68618.6 |
| diguanylate cyclase domain-containing protein | EL161_RS01155 | Not Available | Positive | 250008 - 250517 | 20139.2 |
| tetratricopeptide repeat protein | EL161_RS01160 | Not Available | Negative | 250569 - 251816 | 46472.0 |
| energy transducer tonb | EL161_RS01165 | Not Available | Negative | 251819 - 252442 | 22388.1 |
| exbd/tolr family protein | EL161_RS01170 | Not Available | Negative | 252444 - 252848 | 14577.8 |
| mota/tolq/exbb proton channel family protein | EL161_RS01175 | Not Available | Negative | 252862 - 253389 | 19728.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

