Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna internalization-related competence protein comec/rec2 | EL161_RS00980 | Not Available | Negative | 213648 - 215969 | 86043.8 |
| duf2062 domain-containing protein | EL161_RS00985 | Not Available | Positive | 216002 - 216511 | 19163.1 |
| nnrs family protein | EL161_RS00990 | Not Available | Positive | 216922 - 218094 | 42939.7 |
| phosphate-starvation-inducible protein psie | EL161_RS00995 | Not Available | Positive | 218243 - 218647 | 14933.9 |
| pilz domain-containing protein | EL161_RS01000 | Not Available | Positive | 218799 - 219101 | 11414.4 |
| aaa family atpase | EL161_RS01005 | Not Available | Positive | 219179 - 219847 | 24730.0 |
| replication protein repa | EL161_RS01010 | Not Available | Positive | 219834 - 220175 | 12633.3 |
| yech family metal-binding protein | EL161_RS01015 | Not Available | Negative | 220446 - 220697 | 9143.07 |
| sensor histidine kinase | EL161_RS01020 | Not Available | Positive | 220826 - 222508 | 61888.2 |
| two-component system response regulator btsr | EL161_RS01025 | Not Available | Positive | 222505 - 223215 | 26435.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

