Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | EL161_RS00930 | Not Available | Negative | 203227 - 203574 | 12844.1 |
| duf445 domain-containing protein | EL161_RS00935 | Not Available | Negative | 203650 - 204354 | 25618.7 |
| voc family protein | EL161_RS00940 | Not Available | Positive | 204707 - 205087 | 13776.5 |
| duf748 domain-containing protein | EL161_RS00945 | Not Available | Positive | 205355 - 208564 | 117081.0 |
| glutathione s-transferase n-terminal domain-containing protein | EL161_RS00950 | Not Available | Positive | 208798 - 209154 | 13934.1 |
| energy-coupling factor abc transporter permease | EL161_RS00955 | Not Available | Negative | 209214 - 209903 | 26830.4 |
| hypothetical protein | EL161_RS00960 | Not Available | Positive | 210067 - 210531 | 17613.9 |
| trm112 family protein | EL161_RS00965 | Not Available | Negative | 210636 - 210815 | 6519.1 |
| tetraacyldisaccharide 4'-kinase | EL161_RS00970 | Not Available | Negative | 210805 - 211812 | 36343.4 |
| lipid a export permease/atp-binding protein msba | EL161_RS00975 | Not Available | Negative | 211813 - 213615 | 65675.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

