Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system ccda family antitoxin | EL161_RS16785 | Not Available | Positive | 3782837 - 3783082 | 9349.19 |
| ccdb family protein | EL161_RS16790 | Not Available | Positive | 3783082 - 3783399 | 11905.5 |
| Attl | Not Available | Not Available | Positive | 3783675 - 3783687 | Not Available |
| type ii toxin-antitoxin system hipa family toxin | EL161_RS16795 | Not Available | Positive | 3783754 - 3785121 | 51000.0 |
| helix-turn-helix transcriptional regulator | EL161_RS16800 | Not Available | Positive | 3785118 - 3785498 | 13806.0 |
| Issod13 family transposase | EL161_RS16805 | Not Available | Positive | 3785667 - 3786707 | 39613.3 |
| Hicb protein | EL161_RS16810 | Not Available | Negative | 3786870 - 3787211 | 12380.6 |
| Hica protein | EL161_RS16815 | Not Available | Negative | 3787208 - 3787462 | 9481.52 |
| Phi92_gp067 | EL161_RS16820 | Not Available | Positive | 3787818 - 3788369 | 20481.4 |
| Non-functional integrase | EL161_RS16825 | Not Available | Positive | 3788441 - 3788617 | 6570.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

