Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| avast type 1 anti-phage system protein avs1c | EL161_RS09350 | Not Available | Negative | 2148779 - 2149057 | 10737.8 |
| avast type 1 anti-phage system protease avs1b | EL161_RS09355 | Not Available | Negative | 2149065 - 2154866 | 219346.0 |
| avast type 1 anti-phage system mbl fold metallo-hydrolase avs1a | EL161_RS09360 | Not Available | Negative | 2154859 - 2156040 | 43402.1 |
| hypothetical protein | EL161_RS09365 | Not Available | Positive | 2156315 - 2157322 | 38350.6 |
| xre family transcriptional regulator | EL161_RS09370 | Not Available | Positive | 2157544 - 2157846 | 11057.4 |
| hypothetical protein | EL161_RS09375 | Not Available | Positive | 2158019 - 2158339 | 12393.7 |
| duf4440 domain-containing protein | EL161_RS09380 | Not Available | Positive | 2158970 - 2159341 | 14133.8 |
| hypothetical protein | EL161_RS09385 | Not Available | Positive | 2159443 - 2159958 | 20242.8 |
| trkh family potassium uptake protein | EL161_RS09390 | Not Available | Negative | 2160503 - 2161864 | 48817.9 |
| potassium channel family protein | EL161_RS09395 | Not Available | Negative | 2161866 - 2162564 | 25293.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

