Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | EL161_RS09300 | Not Available | Positive | 2133611 - 2134795 | 42973.7 |
| tnsa endonuclease n-terminal domain-containing protein | EL161_RS09305 | Not Available | Positive | 2134925 - 2135746 | 31146.8 |
| transposase | EL161_RS09310 | Not Available | Positive | 2135736 - 2137874 | 82942.7 |
| atp-binding protein | EL161_RS09315 | Not Available | Positive | 2137871 - 2139319 | 55492.2 |
| tnsd family tn7-like transposition protein | EL161_RS09320 | Not Available | Positive | 2139365 - 2140768 | 53968.2 |
| wyl domain-containing protein | EL161_RS09325 | Not Available | Negative | 2140943 - 2141878 | 36144.7 |
| atp-binding protein | EL161_RS09330 | Not Available | Positive | 2142098 - 2145769 | 140110.0 |
| hypothetical protein | EL161_RS09335 | Not Available | Positive | 2145766 - 2146404 | 24137.1 |
| hypothetical protein | EL161_RS09340 | Not Available | Positive | 2146401 - 2147699 | 49778.6 |
| hypothetical protein | EL161_RS09345 | Not Available | Positive | 2147699 - 2148547 | 31382.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

