Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i dna topoisomerase | EL161_RS09200 | Not Available | Positive | 2114933 - 2115496 | 20879.9 |
| l-threonylcarbamoyladenylate synthase | EL161_RS09205 | Not Available | Positive | 2115635 - 2116201 | 20364.4 |
| oxygen-dependent coproporphyrinogen oxidase | EL161_RS09210 | Not Available | Positive | 2116231 - 2117139 | 34182.1 |
| group ii truncated hemoglobin | EL161_RS09215 | Not Available | Negative | 2117171 - 2117608 | 16834.1 |
| shikimate dehydrogenase | EL161_RS09220 | Not Available | Positive | 2117780 - 2118658 | 30883.1 |
| duf1488 domain-containing protein | EL161_RS09225 | Not Available | Positive | 2118679 - 2118954 | 10277.0 |
| gamma carbonic anhydrase family protein | EL161_RS09230 | Not Available | Negative | 2119010 - 2119558 | 19435.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2120073 - 2121615 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2121922 - 2124815 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2124945 - 2125060 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

