Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr/smtb family transcription factor | EL161_RS09150 | Not Available | Negative | 2105227 - 2105535 | 11432.9 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | EL161_RS09155 | Not Available | Positive | 2105734 - 2106288 | 20700.1 |
| trkh family potassium uptake protein | EL161_RS09160 | Not Available | Negative | 2106335 - 2107777 | 52818.5 |
| trk system potassium transporter trka | EL161_RS09165 | Not Available | Negative | 2107789 - 2109198 | 51429.0 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | EL161_RS09170 | Not Available | Negative | 2109214 - 2110500 | 47833.5 |
| methionyl-trna formyltransferase | EL161_RS09175 | Not Available | Negative | 2110503 - 2111459 | 34532.4 |
| peptide deformylase | EL161_RS09180 | Not Available | Negative | 2111475 - 2111981 | 19278.2 |
| lysm peptidoglycan-binding domain-containing protein | EL161_RS09185 | Not Available | Positive | 2112107 - 2113231 | 41402.8 |
| dna-processing protein dpra | EL161_RS09190 | Not Available | Positive | 2113315 - 2114331 | 37056.7 |
| duf494 family protein | EL161_RS09195 | Not Available | Positive | 2114334 - 2114810 | 18808.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

