Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit beta | EL161_RS09050 | Not Available | Positive | 2078878 - 2079978 | 40878.3 |
| dna replication/repair protein recf | EL161_RS09055 | Not Available | Positive | 2080141 - 2081223 | 40986.2 |
| dna topoisomerase (atp-hydrolyzing) subunit b | EL161_RS09060 | Not Available | Positive | 2081240 - 2083657 | 89916.9 |
| glutathione s-transferase family protein | EL161_RS09065 | Not Available | Negative | 2083739 - 2084395 | 24887.7 |
| lysr family transcriptional regulator | EL161_RS09070 | Not Available | Positive | 2084522 - 2085370 | 30601.1 |
| hdod domain-containing protein | EL161_RS09075 | Not Available | Positive | 2085526 - 2086569 | 39125.7 |
| glycine--trna ligase subunit beta | EL161_RS09080 | Not Available | Negative | 2086633 - 2088699 | 75160.3 |
| glycine--trna ligase subunit alpha | EL161_RS09085 | Not Available | Negative | 2088709 - 2089614 | 34480.0 |
| dna-3-methyladenine glycosylase i | EL161_RS09090 | Not Available | Positive | 2089733 - 2090308 | 21514.8 |
| amidohydrolase family protein | EL161_RS09095 | Not Available | Negative | 2090394 - 2093582 | 117757.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

