Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | EL161_RS09000 | Not Available | Negative | 2067863 - 2068483 | 23328.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | EL161_RS09005 | Not Available | Negative | 2068601 - 2070490 | 69269.0 |
| fmn-binding protein mioc | EL161_RS09010 | Not Available | Negative | 2070931 - 2071371 | 15961.9 |
| pot family mfs transporter | EL161_RS09015 | Not Available | Positive | 2071549 - 2073096 | 56545.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | EL161_RS09020 | Not Available | Negative | 2073200 - 2074561 | 49169.9 |
| membrane protein insertase yidc | EL161_RS09025 | Not Available | Negative | 2074665 - 2076290 | 60529.9 |
| membrane protein insertion efficiency factor yidd | EL161_RS09030 | Not Available | Negative | 2076294 - 2076548 | 9431.57 |
| ribonuclease p protein component | EL161_RS09035 | Not Available | Negative | 2076515 - 2076871 | 13829.0 |
| 50s ribosomal protein l34 | EL161_RS09040 | Not Available | Negative | 2076892 - 2077029 | 5125.4 |
| chromosomal replication initiator protein dnaa | EL161_RS09045 | Not Available | Positive | 2077475 - 2078857 | 51987.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

