Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 2046786 - 2048328 | Not Available |
| cytochrome c oxidase accessory protein ccog | EL161_RS08905 | Not Available | Negative | 2048848 - 2050275 | 54765.4 |
| hypothetical protein | EL161_RS08910 | Not Available | Positive | 2050367 - 2050717 | 13264.1 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | EL161_RS08915 | Not Available | Positive | 2050834 - 2051736 | 33325.5 |
| duf2061 domain-containing protein | EL161_RS08920 | Not Available | Positive | 2051904 - 2052107 | 7453.11 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | EL161_RS08925 | Not Available | Negative | 2052187 - 2054016 | 66791.0 |
| deor/glpr family dna-binding transcription regulator | EL161_RS08930 | Not Available | Negative | 2054092 - 2054862 | 28227.8 |
| tonb-dependent receptor | EL161_RS08935 | Not Available | Negative | 2055066 - 2057159 | 78557.2 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | EL161_RS08940 | Not Available | Negative | 2057421 - 2058785 | 48015.0 |
| f0f1 atp synthase subunit epsilon | EL161_RS08945 | Not Available | Negative | 2058956 - 2059384 | 15150.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

