Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | EL161_RS08795 | Not Available | Negative | 2020011 - 2021285 | 46689.7 |
| tetr/acrr family transcriptional regulator | EL161_RS08800 | Not Available | Positive | 2021531 - 2022178 | 25099.9 |
| glycine c-acetyltransferase | EL161_RS08805 | Not Available | Positive | 2022438 - 2023631 | 42862.4 |
| l-threonine 3-dehydrogenase | EL161_RS08810 | Not Available | Positive | 2023643 - 2024668 | 37252.2 |
| thiosulfate sulfurtransferase glpe | EL161_RS08815 | Not Available | Positive | 2024767 - 2025072 | 11115.8 |
| rhomboid family intramembrane serine protease glpg | EL161_RS08820 | Not Available | Positive | 2025069 - 2025911 | 30706.5 |
| isoprenoid biosynthesis glyoxalase elbb | EL161_RS08825 | Not Available | Negative | 2025988 - 2026644 | 23165.1 |
| dna polymerase i | EL161_RS08830 | Not Available | Positive | 2027030 - 2029798 | 102044.0 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | EL161_RS08835 | Not Available | Negative | 2030776 - 2031435 | 24441.5 |
| c-type cytochrome | EL161_RS08840 | Not Available | Positive | 2031605 - 2032228 | 21806.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

