Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EL161_RS08690 | Not Available | Positive | 1999144 - 1999851 | 25558.1 |
| energy-coupling factor abc transporter atp-binding protein | EL161_RS08695 | Not Available | Positive | 1999855 - 2000562 | 26099.6 |
| molybdenum cofactor guanylyltransferase moba | EL161_RS08700 | Not Available | Positive | 2000546 - 2001139 | 21592.1 |
| bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein mobb/molybdopterin molybdotransferase moea | EL161_RS08705 | Not Available | Positive | 2001170 - 2002969 | 64510.2 |
| gtp 3',8-cyclase moaa | EL161_RS08710 | Not Available | Positive | 2002986 - 2003969 | 36918.8 |
| hypothetical protein | EL161_RS08715 | Not Available | Positive | 2004051 - 2004506 | 16944.5 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | EL161_RS08720 | Not Available | Positive | 2004531 - 2005346 | 29860.4 |
| arnt family glycosyltransferase | EL161_RS08725 | Not Available | Negative | 2005408 - 2007132 | 65384.4 |
| tvp38/tmem64 family protein | EL161_RS08730 | Not Available | Negative | 2007146 - 2007805 | 23885.9 |
| glycosyltransferase family 2 protein | EL161_RS08735 | Not Available | Negative | 2007807 - 2008538 | 27360.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

