Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy-coupling factor transporter transmembrane component t | EL161_RS08640 | Not Available | Negative | 1986066 - 1986749 | 25497.0 |
| atp-binding cassette domain-containing protein | EL161_RS08645 | Not Available | Negative | 1986739 - 1988109 | 50021.4 |
| tonb-dependent receptor plug domain-containing protein | EL161_RS08650 | Not Available | Negative | 1988111 - 1990294 | 77740.9 |
| isochorismate synthase menf | EL161_RS08655 | Not Available | Positive | 1990703 - 1992061 | 51241.2 |
| abc transporter substrate-binding protein | EL161_RS08660 | Not Available | Negative | 1992070 - 1992795 | 27271.8 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | EL161_RS08665 | Not Available | Positive | 1993038 - 1993697 | 24477.3 |
| gnat family n-acetyltransferase | EL161_RS08670 | Not Available | Positive | 1993797 - 1994264 | 17564.4 |
| cache domain-containing protein | EL161_RS08675 | Not Available | Negative | 1994520 - 1996655 | 80250.3 |
| sigma-54-dependent transcriptional regulator | EL161_RS08680 | Not Available | Negative | 1996656 - 1998038 | 51746.3 |
| substrate-binding domain-containing protein | EL161_RS08685 | Not Available | Positive | 1998323 - 1999147 | 29439.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

