Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | EL161_RS08590 | Not Available | Negative | 1975799 - 1976344 | 20666.9 |
| metal transporter | EL161_RS08595 | Not Available | Positive | 1976489 - 1977691 | 44583.9 |
| membrane fusion-like protein | EL161_RS08600 | Not Available | Positive | 1977688 - 1978716 | 37017.0 |
| efflux rnd transporter permease subunit | EL161_RS08605 | Not Available | Positive | 1978718 - 1981771 | 110762.0 |
| duf3240 family protein | EL161_RS08610 | Not Available | Positive | 1981768 - 1982073 | 11623.0 |
| paraquat-inducible protein a | EL161_RS08615 | Not Available | Negative | 1982373 - 1983008 | 22773.2 |
| hd-gyp domain-containing protein | EL161_RS08620 | Not Available | Negative | 1983114 - 1984304 | 44387.2 |
| hypothetical protein | EL161_RS08625 | Not Available | Negative | 1984524 - 1984766 | 9811.57 |
| dna-binding protein | EL161_RS08630 | Not Available | Negative | 1984774 - 1985511 | 26377.7 |
| hypothetical protein | EL161_RS08635 | Not Available | Negative | 1985527 - 1986069 | 19149.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

