Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EL161_RS08545 | Not Available | Positive | 1964991 - 1965812 | 30053.3 |
| hypothetical protein | EL161_RS22290 | Not Available | Positive | 1966087 - 1966263 | 6525.03 |
| sodium/proline symporter putp | EL161_RS08550 | Not Available | Positive | 1966267 - 1967763 | 53441.1 |
| glutamate 5-kinase | EL161_RS08555 | Not Available | Positive | 1967773 - 1968879 | 39981.4 |
| glutamate-5-semialdehyde dehydrogenase | EL161_RS08560 | Not Available | Positive | 1968891 - 1970138 | 45081.5 |
| p-loop ntpase fold protein | EL161_RS08565 | Not Available | Negative | 1970216 - 1971727 | 57652.4 |
| duf3612 domain-containing protein | EL161_RS08570 | Not Available | Negative | 1971970 - 1973502 | 56802.6 |
| malate synthase | EL161_RS08575 | Not Available | Positive | 1973711 - 1974274 | 20761.5 |
| yeih family protein | EL161_RS08580 | Not Available | Positive | 1974540 - 1975490 | 33601.0 |
| hypothetical protein | EL161_RS08585 | Not Available | Negative | 1975540 - 1975686 | 5220.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

