Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | EL161_RS08490 | Not Available | Negative | 1951052 - 1954186 | 112391.0 |
| efflux rnd transporter periplasmic adaptor subunit | EL161_RS08495 | Not Available | Negative | 1954196 - 1955344 | 40265.3 |
| torf family putative porin | EL161_RS08500 | Not Available | Positive | 1956188 - 1956934 | 27305.7 |
| dna-3-methyladenine glycosylase i | EL161_RS08505 | Not Available | Negative | 1957036 - 1957725 | 25626.7 |
| glutathione s-transferase family protein | EL161_RS08510 | Not Available | Positive | 1957930 - 1958577 | 25325.5 |
| thioesterase family protein | EL161_RS08520 | Not Available | Negative | 1958715 - 1959245 | 21130.1 |
| oligopeptidase a | EL161_RS08525 | Not Available | Negative | 1959374 - 1961413 | 76712.7 |
| hypothetical protein | EL161_RS08530 | Not Available | Positive | 1961677 - 1962459 | 28913.0 |
| hypothetical protein | EL161_RS08535 | Not Available | Positive | 1962569 - 1963099 | 19687.2 |
| glutathione-disulfide reductase | EL161_RS08540 | Not Available | Positive | 1963267 - 1964622 | 48407.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

