Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | EL161_RS08390 | Not Available | Positive | 1927142 - 1927825 | 25766.7 |
| atp-binding protein | EL161_RS08395 | Not Available | Positive | 1927818 - 1929182 | 50439.7 |
| duf3300 domain-containing protein | EL161_RS08400 | Not Available | Positive | 1929597 - 1931102 | 58914.3 |
| cytoplasmic protein | EL161_RS08405 | Not Available | Negative | 1931158 - 1931634 | 17780.3 |
| eal domain-containing protein | EL161_RS08410 | Not Available | Negative | 1931710 - 1935339 | 134981.0 |
| hypothetical protein | EL161_RS08415 | Not Available | Positive | 1935903 - 1936292 | 14167.6 |
| ubiquinol oxidase subunit ii | EL161_RS08420 | Not Available | Positive | 1936482 - 1937510 | 37745.3 |
| cytochrome o ubiquinol oxidase subunit i | EL161_RS08425 | Not Available | Positive | 1937513 - 1939492 | 73623.1 |
| cytochrome o ubiquinol oxidase subunit iii | EL161_RS08430 | Not Available | Positive | 1939494 - 1940114 | 22885.1 |
| cytochrome o ubiquinol oxidase subunit iv | EL161_RS08435 | Not Available | Positive | 1940114 - 1940455 | 12481.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

