Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 151282 - 151357 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 151520 - 151595 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 151633 - 151708 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 151763 - 151838 | Not Available |
| tol-pal system protein ybgf | EL161_RS00700 | Not Available | Negative | 151981 - 152733 | 27093.9 |
| peptidoglycan-associated lipoprotein pal | EL161_RS00705 | Not Available | Negative | 152758 - 153294 | 19444.0 |
| tol-pal system beta propeller repeat protein tolb | EL161_RS00710 | Not Available | Negative | 153341 - 154669 | 48347.0 |
| cell envelope integrity protein tola | EL161_RS00715 | Not Available | Negative | 154679 - 155701 | 37179.2 |
| protein tolr | EL161_RS00720 | Not Available | Negative | 155702 - 156136 | 15615.1 |
| protein tolq | EL161_RS00725 | Not Available | Negative | 156136 - 156822 | 25132.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

