Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tex family protein | EL161_RS08340 | Not Available | Negative | 1911354 - 1913693 | 85030.2 |
| transcription elongation factor greb | EL161_RS08345 | Not Available | Negative | 1913823 - 1914326 | 19693.4 |
| diguanylate cyclase | EL161_RS08350 | Not Available | Negative | 1914385 - 1915329 | 35290.7 |
| pas domain s-box protein | EL161_RS08355 | Not Available | Negative | 1915329 - 1920212 | 180712.0 |
| two-component system response regulator ompr | EL161_RS08360 | Not Available | Positive | 1920581 - 1921306 | 27360.2 |
| two-component system sensor histidine kinase envz | EL161_RS08365 | Not Available | Positive | 1921346 - 1922662 | 49103.3 |
| methyl-accepting chemotaxis protein | EL161_RS08370 | Not Available | Positive | 1922779 - 1924755 | 72578.6 |
| peroxiredoxin | EL161_RS08375 | Not Available | Negative | 1924812 - 1925285 | 16507.1 |
| choice-of-anchor h family protein | EL161_RS08380 | Not Available | Negative | 1925547 - 1926479 | 33576.0 |
| pepsy domain-containing protein | EL161_RS08385 | Not Available | Positive | 1926838 - 1927140 | 10801.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

