Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate--coa ligase | EL161_RS08140 | Not Available | Positive | 1866108 - 1867583 | 52916.7 |
| rna polymerase sigma factor rpoh | EL161_RS08145 | Not Available | Negative | 1867666 - 1868523 | 32316.3 |
| permease-like cell division protein ftsx | EL161_RS08150 | Not Available | Negative | 1868754 - 1869719 | 35931.3 |
| cell division atp-binding protein ftse | EL161_RS08155 | Not Available | Negative | 1869716 - 1870417 | 25688.5 |
| signal recognition particle-docking protein ftsy | EL161_RS08160 | Not Available | Negative | 1870421 - 1872172 | 62852.8 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | EL161_RS08165 | Not Available | Positive | 1872386 - 1873033 | 23957.4 |
| duf1145 domain-containing protein | EL161_RS08170 | Not Available | Positive | 1873035 - 1873310 | 10403.5 |
| napc/nirt family cytochrome c cyma | EL161_RS08175 | Not Available | Negative | 1873381 - 1873944 | 20807.8 |
| hypothetical protein | EL161_RS08180 | Not Available | Positive | 1874358 - 1874720 | 13214.1 |
| duf2057 family protein | EL161_RS08185 | Not Available | Positive | 1874823 - 1875278 | 16579.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

