Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-methionine/branched-chain amino acid transporter | EL161_RS08090 | Not Available | Negative | 1856114 - 1857382 | 44595.4 |
| lrp/asnc family transcriptional regulator | EL161_RS08095 | Not Available | Positive | 1857601 - 1858032 | 16316.7 |
| cytochrome c nitrite reductase subunit nrfd | EL161_RS08100 | Not Available | Negative | 1858303 - 1859244 | 34352.5 |
| 4fe-4s dicluster domain-containing protein | EL161_RS08105 | Not Available | Negative | 1859241 - 1859927 | 24580.6 |
| nitrite reductase | EL161_RS08110 | Not Available | Negative | 1859932 - 1860396 | 17102.6 |
| duf2726 domain-containing protein | EL161_RS08115 | Not Available | Negative | 1860474 - 1860947 | 18215.1 |
| lysr family transcriptional regulator | EL161_RS08120 | Not Available | Positive | 1861362 - 1862330 | 36480.1 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | EL161_RS08125 | Not Available | Positive | 1862505 - 1864226 | 63199.5 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | EL161_RS08130 | Not Available | Positive | 1864226 - 1865029 | 29802.8 |
| o-succinylbenzoate synthase | EL161_RS08135 | Not Available | Positive | 1865052 - 1866101 | 38315.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

