Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | EL161_RS07990 | Not Available | Positive | 1832278 - 1834305 | 75988.2 |
| m16 family metallopeptidase | EL161_RS07995 | Not Available | Negative | 1834380 - 1835855 | 52970.4 |
| m16 family metallopeptidase | EL161_RS08000 | Not Available | Negative | 1835852 - 1837183 | 49198.5 |
| amidohydrolase | EL161_RS08005 | Not Available | Negative | 1837321 - 1838733 | 49553.1 |
| helix-turn-helix transcriptional regulator | EL161_RS08010 | Not Available | Positive | 1839054 - 1840049 | 38176.4 |
| cell division protein ftsz | EL161_RS08015 | Not Available | Positive | 1840131 - 1841267 | 40148.4 |
| class i sam-dependent methyltransferase | EL161_RS08020 | Not Available | Negative | 1841284 - 1841922 | 24400.8 |
| hypothetical protein | EL161_RS08025 | Not Available | Negative | 1841983 - 1842336 | 13451.0 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | EL161_RS08030 | Not Available | Positive | 1842628 - 1844748 | 78596.1 |
| pp_01558 | EL161_RS08035 | Not Available | Negative | 1845016 - 1845618 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

